Antibiotics act as antimicrobial agents by inhibiting the growth or killing of bacteria. They are used to treat bacterial infections in the body. Antibiotics work by targeting the ribosome, which is the structure responsible for protein synthesis in cells. However, antibiotics can affect prokaryotic and eukaryotic ribosomes differently.

Step 1: Understanding the concept of ribosomes
Ribosomes are protein synthesis machines present in cells that convert genetic information into proteins. They are composed of two subunits, the large subunit and the small subunit, and are essential for life.

Step 2: Distinguishing between prokaryotic and eukaryotic ribosomes
Prokaryotes and eukaryotes are different types of cells that have different characteristics and functions. Prokaryotes are single-celled organisms without a nucleus and other membrane-bound organelles. Eukaryotes, on the other hand, are cells with a nucleus and other organelles surrounded by membranes.

Prokaryotic ribosomes are smaller and simpler than eukaryotic ribosomes. They are typically found in bacterial cells, which are prokaryotes. Eukaryotic ribosomes, however, are found in eukaryotic cells, such as animal, plant, and fungal cells.

Step 3: Analyzing how antibiotics affect prokaryotic and eukaryotic ribosomes differently
Antibiotics are designed to specifically target prokaryotic ribosomes, which have differences in size, structure, and function compared to eukaryotic ribosomes. The main difference between prokaryotic and eukaryotic ribosomes lies in their overall shape and the location of their binding sites for tRNAs (transfer RNA), which carry amino acids during protein synthesis.

Prokaryotic ribosomes are circular, while eukaryotic ribosomes are more complex, with a more elongated shape. This structural difference leads to specific binding sites for tRNAs, which is important for the protein synthesis process.

Step 4: Investigating the mechanism behind antibiotic resistance
One of the reasons why antibiotics can affect prokaryotic and eukaryotic ribosomes differently is that prokaryotes have evolved mechanisms to develop resistance against antibiotics. Bacteria can adapt to the presence of antibiotics by either modifying their ribosomes to evade the effect of the drugs, or by creating enzymes that neutralize the antibiotic, rendering it ineffective.

In contrast, eukaryotic cells do not have the same mechanisms for developing antibiotic resistance. Since eukaryotic cells do not possess ribosomes specifically targeted by antibiotics, they are less susceptible to these drugs and do not develop resistance as easily.

In conclusion, the difference in the shape, structure, and binding sites of prokaryotic and eukaryotic ribosomes allows antibiotics to target prokaryotic cells more effectively than eukaryotic cells. The development of antibiotic resistance is more prevalent among prokaryotic cells due to their ability to adapt and evolve to avoid the effects of antibiotics, whereas eukaryotes are less susceptible to antibiotic treatment and less likely to develop resistance.